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Command-Line Usage

OmniGenBench provides a command-line interface (CLI) for running tasks and benchmarks. You can run OmniGenBench in one line!

autobench --model_name_or_path "yangheng/OmniGenome-186M" --benchmark "RGB" --trainer accelerate

title

This command sets the model to yangheng/OmniGenome-186M, the benchmark to RGB, and use accelerate as the trainer. All acceptable parameters are listed below.

Parameter Name Description Default Value
--model_name_or_path The name or path of the model to use. yangheng/OmniGenome-186M
--benchmark The benchmark to use. RGB
--trainer The trainer to use. accelerate

Tip

OmniGenBench provides plug-and-play evaluation for over 30 genomic foundation models, and supports 5 curated benchmarks.